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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72954519_72955817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72954519 - 72955817

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGCTTA

5'SS Class:

major

3'SS Sequence:

TTTCCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CAGATATTAATC

Flanking Amino Acid:

KSWLSVLPSEMEKCLLAFPC

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.2

68.8

38.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

87.6

0.85

0.7

85.2

28.1

Minor 5ss

49.9

-0

2.4

65.1

46.2

Minor BPS

48.4

-0.1

1.6

52.79

38.8

Associated Gene:

Gene:

SHOC1

Ensembl Gene ID:

ENSAPLG00000017936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043452

72926363 - 72961043

34681