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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72957194_72957388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72957194 - 72957388

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TAATTTTTCATT

Flanking Amino Acid:

ELLAKAQTSTGPPHVNSEAI

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

32.1

Major BPS

100

1.24

0.5

100

Major PPT

75.4

0.57

0.9

69.7

36.7

Minor 5ss

40.6

-1

3.1

57.9

46.2

Minor BPS

0.27

1.7

73.01

38.5

Associated Gene:

Gene:

SHOC1

Ensembl Gene ID:

ENSAPLG00000017936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043452

72926363 - 72961043

34681