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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72957947_72960925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72957947 - 72960925

Intron Length:

2979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ACTTCTTTACCA

Flanking Amino Acid:

YLWTKGKTLTDSGFEEVPGI

Intron Amino Acid Position:

905

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

82.4

29.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.61

0.9

70.4

39.4

Minor 5ss

42.1

-0.9

2.4

52.1

44.5

Minor BPS

66.6

0.52

1.6

73.1

39.3

Associated Gene:

Gene:

SHOC1

Ensembl Gene ID:

ENSAPLG00000017936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043452

72926363 - 72961043

34681