Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_72991165_72993260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72991165 - 72993260

Intron Length:

2096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTCTACTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTATTCTAATA

Flanking Amino Acid:

QDPSAVSFVTNFTIIYVKMG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.4

0.57

0.8

73.9

30.8

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

51.6

0.05

1.7

63.75

37.2

Associated Gene:

Gene:

ECPAS

Ensembl Gene ID:

ENSAPLG00000006453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006785

72978981 - 73036969

57989