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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73001115_73001374_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73001115 - 73001374

Intron Length:
260

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGATTA

5'SS Class:
strong_major

3'SS Sequence:
CTCTTTCTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAC

U12 Branch Point Sequence:
ATTGTCTTAACT

Flanking Amino Acid:
LGDIPLKTKEGSVLKPEMKR

Intron Amino Acid Position:
317

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.3
1.02
0.7
86.9
22.8

Major BPS
77.1
0.67
1
77.9
32.2

Major PPT
78.6
0.64
0.9
75.5
33.1

Minor 5ss
41.5
-0.9
3.1
56
48.2

Minor BPS
79.2
0.99
1.2
89.83
34.4

Associated Gene:

Gene:
ECPAS

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72992891 - 73036416
43526

72992891 - 73036969
44079

72978981 - 73036969
57989