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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73005436_73006572_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
73005436 - 73006572

Intron Length:
1137

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCC|GTAAGTTTT

5'SS Class:
major

3'SS Sequence:
TTTCTCCTTCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATAAT

U12 Branch Point Sequence:
TTCTCCTTCAAG

Flanking Amino Acid:
RYLLLLAAGDPREEVHGEAQ

Intron Amino Acid Position:
526

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.1
0.55
1.3
79.1
37.5

Major BPS
71.2
0.53
1
70.3
31.9

Major PPT
77.6
0.62
1
76
32.9

Minor 5ss
48
-0.2
2.8
71.9
38.1

Minor BPS
59.9
0.17
2
68.4
44.9

Associated Gene:

Gene:
ECPAS

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72992891 - 73036416
43526

72992891 - 73036969
44079

72978981 - 73036969
57989