Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73009763_73010299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73009763 - 73010299

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

AATAACTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATA

Flanking Amino Acid:

LLQQLLAGVGGLPVMYCLLE

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.32

1.1

59.1

45.9

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

ECPAS

Ensembl Gene ID:

ENSAPLG00000006453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029515

72992891 - 73036416

43526

ENSAPLT00000023146

72992891 - 73036969

44079

ENSAPLT00000006785

72978981 - 73036969

57989