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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73019767_73020723_F


Intron Information:

Intron Rank:
27

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
73019767 - 73020723

Intron Length:
957

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGTGT

5'SS Class:
major

3'SS Sequence:
TCTTTTCCACCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAACAC

U12 Branch Point Sequence:
GTGAAGTTAACA

Flanking Amino Acid:
TLVDTLMTGKRAKHEMTGET

Intron Amino Acid Position:
1040

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.1
63.9
42.9

Major BPS
61.1
0.28
1.1
69.4
35.9

Major PPT
80.6
0.69
0.8
74.8
34.9

Minor 5ss
36.7
-1.5
3.6
56
48.2

Minor BPS
47.9
-0.1
2.2
62.04
43.6

Associated Gene:

Gene:
ECPAS

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72992891 - 73036416
43526

72992891 - 73036969
44079

72978981 - 73036969
57989