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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73047000_73049534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73047000 - 73049534

Intron Length:

2535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAA

U12 Branch Point Sequence:

TTCTCTGTATTA

Flanking Amino Acid:

ENLVELSGGQRSLVALSFIL

Intron Amino Acid Position:

1078

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

57.2

0.18

1.1

58.3

34.3

Major PPT

73.6

0.53

0.9

74.1

35.3

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

48.7

-0.1

2.2

66.17

41.5

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019046

73045836 - 73070614

24779

ENSAPLT00000007549

73045836 - 73070430

24595