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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73051341_73052198_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

73051341 - 73052198

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTCGTTGCATAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

AGTTCATTGAGA

Flanking Amino Acid:

MNMLSDAEEKYNDLMKKKRI

Intron Amino Acid Position:

986

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

56.1

0.14

1.1

60.7

39.4

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

53.2

0.09

1.9

66.87

39.1

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019046

73045836 - 73070614

24779

ENSAPLT00000007549

73045836 - 73070430

24595