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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73053157_73053433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73053157 - 73053433

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GCTGTCTGAATT

Flanking Amino Acid:

ATEAEASKSKESVEKAQKEL

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

84.8

0.78

0.8

81.8

34.9

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

55.7

0.26

1.6

68.72

42.7

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007549

73045836 - 73070430

24595

ENSAPLT00000019046

73045836 - 73070614

24779