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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73056167_73056708_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

73056167 - 73056708

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAATTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTCACCGAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTAGAT

U12 Branch Point Sequence:

ATTAGATTAACT

Flanking Amino Acid:

VFDPQGTLSGGAGTQTVPIL

Intron Amino Acid Position:

654

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

1.1

87.2

29.4

Major BPS

70.4

0.51

66.8

39.9

Major PPT

59.6

0.22

34.9

Minor 5ss

28.1

-2.5

3.7

43.8

43.3

Minor BPS

57.7

0.32

2.1

80.72

40.5

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019046

73045836 - 73070614

24779

ENSAPLT00000007549

73045836 - 73070430

24595