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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73059298_73063293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73059298 - 73063293

Intron Length:

3996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTATTCCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTCCTTATAG

Flanking Amino Acid:

ISKAVTEAKQAQMKLKYTQQ

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

82.4

28.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

82.4

0.73

0.8

77.5

31.1

Minor 5ss

-1.7

3.5

49.9

46.6

Minor BPS

64.2

0.31

1.8

70.25

42.4

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019046

73045836 - 73070614

24779

ENSAPLT00000007549

73045836 - 73070430

24595