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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73066062_73068589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73066062 - 73068589

Intron Length:

2528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTGT

5'SS Class:

major

3'SS Sequence:

TGTTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GATGTTTTATTT

Flanking Amino Acid:

VNNPHFLIMQILSMVEEAAG

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

41.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.5

0.75

0.8

82.4

Minor 5ss

44.6

-0.6

3.1

65.1

46.2

Minor BPS

49.5

0.05

1.6

64.73

40.6

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007549

73045836 - 73070430

24595