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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73068713_73069391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73068713 - 73069391

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATGATATGAAGT

Flanking Amino Acid:

SCDEITITRQVVIGGKNKYL

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

78.7

0.65

0.9

72.4

37.7

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

44.1

-0.3

1.9

60.91

42.4

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019046

73045836 - 73070614

24779

ENSAPLT00000007549

73045836 - 73070430

24595