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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73070431_73070569_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

73070431 - 73070569

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAAAAAT

5'SS Class:

major

3'SS Sequence:

CCCCTCAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

36.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

59.9

0.22

54.7

32.8

Minor 5ss

34.1

-1.8

3.1

40.7

45.3

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

SMC2

Ensembl Gene ID:

ENSAPLG00000007236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019046

73045836 - 73070614

24779