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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73080580_73081233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

73080580 - 73081233

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGAGCC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACCGAC

U12 Branch Point Sequence:

AGGCGCTTACCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

62.4

34.6

Major BPS

0.03

1.2

50.1

36.7

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

39.5

-1.2

3.3

51.5

39.5

Minor BPS

44.9

-0.5

2.1

47.85

45.1

Associated Gene:

Gene:

PTGR1

Ensembl Gene ID:

ENSAPLG00000008342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027667

73080482 - 73089297

8816

ENSAPLT00000008696

73080482 - 73090179

9698