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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73081341_73083571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73081341 - 73083571

Intron Length:

2231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TGCCCAGTAATT

Flanking Amino Acid:

KIELPSLQNGELLLESVFLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

71.2

0.53

37.5

Major PPT

89.3

0.88

0.8

87.9

29.4

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

46.9

-0.1

2.2

67.31

43.4

Associated Gene:

Gene:

PTGR1

Ensembl Gene ID:

ENSAPLG00000008342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008696

73080482 - 73090179

9698

ENSAPLT00000027667

73080482 - 73089297

8816