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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73087909_73088959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73087909 - 73088959

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAGCAT

U12 Branch Point Sequence:

TTTCTCCTACAG

Flanking Amino Acid:

SQYNDSVPQKGPYVQIPMIF

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

32.7

Major BPS

50.9

0.02

1.5

63.4

42.8

Major PPT

86.3

0.82

0.7

80.5

Minor 5ss

34.6

-1.8

3.1

44.1

43.8

Minor BPS

45.8

-0.4

58.57

42.7

Associated Gene:

Gene:

PTGR1

Ensembl Gene ID:

ENSAPLG00000008342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027667

73080482 - 73089297

8816

ENSAPLT00000008696

73080482 - 73090179

9698