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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73127911_73128500_R


Intron Information:

Intron Rank:
43

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73127911 - 73128500

Intron Length:
590

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGTACA

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTTGTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGCTCAC

U12 Branch Point Sequence:
TGTAGCTCACCA

Flanking Amino Acid:
TWTPTTAKCEKISCGPPAHI

Intron Amino Acid Position:
3407

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.9
0.87
0.9
83.5
27.8

Major BPS
61
0.28
1.1
63.1
35.8

Major PPT
83.6
0.76
0.8
84.5
30.4

Minor 5ss
37.7
-1.4
2.7
44.2
37

Minor BPS
45.3
-0.3
2.2
61.24
44.4

Associated Gene:

Gene:
SVEP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73115905 - 73236806
120902

73115905 - 73236806
120902