Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73128678_73130190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73128678 - 73130190

Intron Length:

1513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGTGTGTT

5'SS Class:

major

3'SS Sequence:

TTTCTTTGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGCAC

U12 Branch Point Sequence:

TTTCTTTGAACA

Flanking Amino Acid:

RWSNPLPLCKPNPCPVPFII

Intron Amino Acid Position:

3348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.3

36.6

Major BPS

49.1

-0

1.3

60.7

37.6

Major PPT

0.65

76.9

Minor 5ss

40.6

-1

3.3

56.4

Minor BPS

66.9

0.53

1.4

77.33

32.8

Associated Gene:

Gene:

SVEP1

Ensembl Gene ID:

ENSAPLG00000008787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046750

73115905 - 73236806

120902

ENSAPLT00000009176

73115905 - 73236806

120902