Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73147379_73148014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73147379 - 73148014

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAA

U12 Branch Point Sequence:

ATGTTATTAAGA

Flanking Amino Acid:

PYKGDGKKCTEPVKCRNPGN

Intron Amino Acid Position:

1791

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

31.2

Major BPS

75.5

0.63

66.3

40.4

Major PPT

88.5

0.87

0.6

87.7

22.3

Minor 5ss

35.8

-1.6

3.3

46.4

48.9

Minor BPS

53.8

0.11

1.9

66.3

40.2

Associated Gene:

Gene:

SVEP1

Ensembl Gene ID:

ENSAPLG00000008787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046750

73115905 - 73236806

120902

ENSAPLT00000009176

73115905 - 73236806

120902