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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73164303_73165007_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73164303 - 73165007

Intron Length:
705

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAAAGT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTCATTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
TTATTTTTCATT

Flanking Amino Acid:
YICICPLGYTGLKCETEMDE

Intron Amino Acid Position:
1231

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.9
0.78
0.9
77.9
36.7

Major BPS
100
1.24
0.5
100
0

Major PPT
85.6
0.8
0.7
78.8
34.4

Minor 5ss
34.5
-1.8
3.1
49.5
46.3

Minor BPS
61.3
0.44
1.7
79.64
37.1

Associated Gene:

Gene:
SVEP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73115905 - 73236806
120902

73115905 - 73236806
120902