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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73168978_73169509_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73168978 - 73169509

Intron Length:
532

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAAGCCAG

5'SS Class:
major

3'SS Sequence:
TACAACATTACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAA

U12 Branch Point Sequence:
TTGTGTTTACAA

Flanking Amino Acid:
PGSVLKGRMCVNCPLGTYYS

Intron Amino Acid Position:
1005

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79
0.68
1
61.5
44.7

Major BPS
73.5
0.59
1
81.3
29.9

Major PPT
67.3
0.39
1
58.4
41.2

Minor 5ss
37.4
-1.4
3.1
44.4
44.4

Minor BPS
48
-0.1
2.1
63.78
43

Associated Gene:

Gene:
SVEP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73115905 - 73236806
120902

73115905 - 73236806
120902