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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73172202_73174376_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73172202 - 73174376

Intron Length:
2175

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAGGTTAG

5'SS Class:
major

3'SS Sequence:
TTTATATTGGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
TATTTTTTAACA

Flanking Amino Acid:
DAFQSALGKMVPSFCNDVDD

Intron Amino Acid Position:
827

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.8
0.66
1
67.6
40.2

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
65.6
0.35
1.2
68.5
41.3

Minor 5ss
38.3
-1.3
3.1
45
44.5

Minor BPS
81.2
0.98
1
83.95
29.4

Associated Gene:

Gene:
SVEP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73115905 - 73236806
120902

73115905 - 73236806
120902