About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73177708_73177925_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73177708 - 73177925

Intron Length:
218

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGATAG

5'SS Class:
strong_major

3'SS Sequence:
TCAACTCTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAA

U12 Branch Point Sequence:
TGTCTTTCAACT

Flanking Amino Acid:
WEEPQFSDNSGAPLTIARSH

Intron Amino Acid Position:
677

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.4
0.86
0.8
73.8
33

Major BPS
78.4
0.71
0.9
81.3
29.8

Major PPT
71
0.47
0.9
62.3
39.4

Minor 5ss
31.8
-2.1
3
37.5
47.2

Minor BPS
62
0.46
1.5
78.21
37.9

Associated Gene:

Gene:
SVEP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73115905 - 73236806
120902

73115905 - 73236806
120902