Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73178034_73178716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73178034 - 73178716

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCAAATTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GTCCCTTCAAAT

Flanking Amino Acid:

ASCTFSVKVIDAEPPVIDRC

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

77.3

0.68

81.5

Major PPT

68.6

0.42

0.9

62.4

39.1

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

51.5

0.13

1.7

67.95

42.5

Associated Gene:

Gene:

SVEP1

Ensembl Gene ID:

ENSAPLG00000008787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046750

73115905 - 73236806

120902

ENSAPLT00000009176

73115905 - 73236806

120902