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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73178847_73180275_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73178847 - 73180275

Intron Length:
1429

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
GAG|GCAAGTTAA

5'SS Class:
strong_major

3'SS Sequence:
CTTCCTATAAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
TTTTTTTTAAGT

Flanking Amino Acid:
PIAEDNSGDEVSVHVTPAFI

Intron Amino Acid Position:
598

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.3
1.12
0.8
80.2
30.6

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
63
0.29
1.1
64.6
34.1

Minor 5ss
29.2
-2.4
3.8
39.9
46.1

Minor BPS
75.6
0.88
1.5
90.89
33.1

Associated Gene:

Gene:
SVEP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73115905 - 73236806
120902

73115905 - 73236806
120902