Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73285003_73288578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73285003 - 73288578

Intron Length:

3576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGCTGG

5'SS Class:

major

3'SS Sequence:

CTCCTTTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTCATATTT

Flanking Amino Acid:

ALSLAETLQKAPFISTPLET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.2

54.4

45.1

Major BPS

100

1.24

0.5

100

Major PPT

79.5

0.66

0.9

75.5

32.9

Minor 5ss

45.7

-0.5

2.5

56.7

47.5

Minor BPS

55.1

0.24

1.9

77.23

39.4

Associated Gene:

Gene:

MUSK

Ensembl Gene ID:

ENSAPLG00000009215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009653

73284924 - 73332978

48055