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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73309382_73312253_F

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
73309382 - 73312253
Intron Length:
2872

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GCT|GTAAGTCCT
5'SS Class:
major
3'SS Sequence:
TTTACTCTCTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAC
U12 Branch Point Sequence:
GGCTTTTTACTC
Flanking Amino Acid:
TITWLENGKAVSAGSIVESV
Intron Amino Acid Position:
252

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.1
0.57
1.1
68.7
42
Major BPS
86.6
0.91
0.8
77.7
36.7
Major PPT
79
0.65
0.8
77.8
30.8
Minor 5ss
39.8
-1.1
3.1
61.7
42.2
Minor BPS
49.3
-0
1.6
54.47
38.4

Associated Gene:

Gene:
MUSK
Ensembl Gene ID:
ENSAPLG00000009215
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000009653
73284924 - 73332978
48055