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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73330185_73332298_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73330185 - 73332298

Intron Length:
2114

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTATCTGAA

5'SS Class:
major

3'SS Sequence:
TCTCCTCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GAGTGAC

U12 Branch Point Sequence:
TGCTCCCCGAGT

Flanking Amino Acid:
FDNPNIVKLLGVCAVGKPMC

Intron Amino Acid Position:
722

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.6
0.58
1.2
70.3
35.9

Major BPS
48.3
-0.1
1.3
40.8
41.4

Major PPT
85.8
0.8
0.7
80.4
24.8

Minor 5ss
43.6
-0.7
3
57.6
47.1

Minor BPS
45.1
-0.3
2.1
65.16
45.2

Associated Gene:

Gene:
MUSK

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73284924 - 73332978
48055