Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73371232_73371318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

73371232 - 73371318

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCCAC

5'SS Class:

major

3'SS Sequence:

GCTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CAAACACTAATA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

63.2

43.4

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

82.1

0.72

0.8

73.1

37.3

Minor 5ss

43.7

-0.7

2.9

59.1

45.6

Minor BPS

44.9

-0.3

1.9

52.55

38.8

Associated Gene:

Gene:

LPAR1

Ensembl Gene ID:

ENSAPLG00000010035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010445

73370619 - 73415529

44911