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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7342501_7343487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7342501 - 7343487

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTCCTT

5'SS Class:

major

3'SS Sequence:

TTCTTTCCACCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTCCTGTTGATT

Flanking Amino Acid:

TLGTKDTSLASFFCAINDMS

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.5

45.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

80.3

0.68

0.8

74.7

34.9

Minor 5ss

42.5

-0.8

3.4

46.3

Minor BPS

49.4

0.04

2.1

71.44

40.3

Associated Gene:

Gene:

HAUS1

Ensembl Gene ID:

ENSAPLG00000011232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045673

7334981 - 7344835

9855

ENSAPLT00000011716

7334981 - 7345039

10059