Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73475972_73476571_F

Intron Information:

Intron Rank:

131358

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

73475972 - 73476571

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTCGTGG

5'SS Class:

weak_major

3'SS Sequence:

ACCAGGACACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TCTGTGCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.2

43.2

Major BPS

0.82

0.8

24.9

Major PPT

44.8

-0.3

1.1

31.7

34.3

Minor 5ss

42.3

-0.8

3.1

55.4

48.8

Minor BPS

46.9

-0.1

2.4

71.51

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036944

73475007 - 73477506

2500