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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73630982_73632638_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
73630982 - 73632638
Intron Length:
1657

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAAGAGA
5'SS Class:
strong_major
3'SS Sequence:
TCTTCCATGTTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
GTTTTAT
U12 Branch Point Sequence:
TTTTCTTCCATG
Flanking Amino Acid:
IDDRWVCKIADYGLQSYRKE
Intron Amino Acid Position:
450

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.6
0.72
1
72
39.3
Major BPS
78.7
0.71
1.2
71.7
44.6
Major PPT
70.5
0.46
0.9
70.7
34.7
Minor 5ss
31
-2.2
3.2
40
45.7
Minor BPS
52.6
-0
2
67.06
41.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000010110
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010540
73611553 - 73646339
34787