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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73632781_73636146_F

Intron Information:

Intron Rank:
13
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
73632781 - 73636146
Intron Length:
3366

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAATTTCC
5'SS Class:
strong_major
3'SS Sequence:
TTTTATTCTGCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTGAT
U12 Branch Point Sequence:
TTTCCTTTTATT
Flanking Amino Acid:
FEPNSMTDVYSYAIILLEIA
Intron Amino Acid Position:
497

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.5
0.84
0.9
77.7
31.1
Major BPS
96.4
1.15
0.6
85.7
34.9
Major PPT
89.9
0.9
0.7
85.2
29.1
Minor 5ss
41.5
-0.9
2.7
54.2
42.9
Minor BPS
67.9
0.65
1.6
85.32
34.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000010110
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010540
73611553 - 73646339
34787