Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_73698571_73711660_R

Intron Information:

Intron Rank:

146744

Intron Class:

major

Intron Phase:

Intron Coordinates:

73698571 - 73711660

Intron Length:

13090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGAGGA

5'SS Class:

major

3'SS Sequence:

CGTCCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CAAGCCTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.2

39.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

75.2

0.57

0.8

69.4

31.3

Minor 5ss

-2.1

3.4

43.9

44.5

Minor BPS

53.6

0.09

1.8

60.06

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033335

73697609 - 73712105

14497