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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_74052884_74090951_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
74052884 - 74090951

Intron Length:
38068

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTTTGC

5'SS Class:
major

3'SS Sequence:
TCCATATTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
GTGTCCATATTT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
1
67.7
38.4

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
79
0.65
0.9
72.8
36.3

Minor 5ss
46.7
-0.3
2.5
62.1
42.5

Minor BPS
54.1
0.21
1.9
73.69
43.3

Associated Gene:

Gene:
ELAVL2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

74004203 - 74091011
86809