Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7410782_7411722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7410782 - 7411722

Intron Length:

941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGGATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTGTTGTTAATT

Flanking Amino Acid:

CIKLLHESFKDKLLPSHHGA

Intron Amino Acid Position:

1796

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.3

39.5

Major BPS

84.4

0.85

34.5

Major PPT

66.1

0.36

42.3

Minor 5ss

30.6

-2.2

3.4

39.1

46.7

Minor BPS

57.2

0.31

2.1

74.52

43.3

Associated Gene:

Gene:

EPG5

Ensembl Gene ID:

ENSAPLG00000011964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012477

7375605 - 7421765

46161