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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7414978_7417199_F


Intron Information:

Intron Rank:
38

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7414978 - 7417199

Intron Length:
2222

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTTGTGTT

5'SS Class:
major

3'SS Sequence:
TTCTGTCCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTAAT

U12 Branch Point Sequence:
AGTTCTTTTACT

Flanking Amino Acid:
LDDIVIFNPPDMDLQTRHMA

Intron Amino Acid Position:
2035

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1.1
79.1
34.5

Major BPS
85.7
0.89
0.8
84
22.2

Major PPT
77.9
0.63
0.8
70.2
36.5

Minor 5ss
41.1
-1
3.1
58.6
46

Minor BPS
69.9
0.71
1.6
83.18
37.5

Associated Gene:

Gene:
EPG5

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7375605 - 7421765
46161