Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7418404_7419841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7418404 - 7419841

Intron Length:

1438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGACC

5'SS Class:

strong_major

3'SS Sequence:

TCTTAACCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGATCTTAACC

Flanking Amino Acid:

ISKWLEQVYPSSAKEEAKLF

Intron Amino Acid Position:

2189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

72.2

37.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.6

0.62

0.9

35.2

Minor 5ss

39.6

-1.2

52.3

44.6

Minor BPS

75.6

0.78

1.2

78.69

36.8

Associated Gene:

Gene:

EPG5

Ensembl Gene ID:

ENSAPLG00000011964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012477

7375605 - 7421765

46161