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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7420925_7421582_F


Intron Information:

Intron Rank:
42

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7420925 - 7421582

Intron Length:
658

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGTGT

5'SS Class:
strong_major

3'SS Sequence:
CTTGTGTCTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATACAT

U12 Branch Point Sequence:
ATATAGCTAACA

Flanking Amino Acid:
EPKLSQKAQQALTALESMAS

Intron Amino Acid Position:
2300

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.3
0.71
1
70.4
42.5

Major BPS
66.1
0.4
1
73
31.5

Major PPT
74.4
0.55
0.9
65.9
40.9

Minor 5ss
37.1
-1.5
3.6
55.4
48.8

Minor BPS
46
-0.3
2.4
64.82
40.8

Associated Gene:

Gene:
EPG5

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7375605 - 7421765
46161