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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_74478235_74478304_R

Intron Information:

Intron Rank:
144070
Intron Class:
major
Intron Phase:
Intron Coordinates:
74478235 - 74478304
Intron Length:
70

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTAAACATT
5'SS Class:
strong_major
3'SS Sequence:
TCCTCTTCACTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CACTCAA
U12 Branch Point Sequence:
TTCCTCTTCACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.8
0.8
0.9
84.2
33.9
Major BPS
65.6
0.39
0.9
67.3
29.6
Major PPT
71.8
0.49
0.8
66.5
34.3
Minor 5ss
44.7
-0.6
3.1
66
45.2
Minor BPS
63.5
0.51
1.8
80.65
41.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024752
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000021707
74474899 - 74478414
3516