Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7452954_7453550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7452954 - 7453550

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTATTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

ACATCTTTGACT

Flanking Amino Acid:

AIGSAVGMLAALSLATPFSK

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

74.1

0.6

66.7

39.9

Major PPT

0.74

0.8

36.2

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

71.5

0.76

1.2

77.79

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037958

7450747 - 7456139

5393