Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_74533239_74552101_R

Intron Information:

Intron Rank:

137396

Intron Class:

major

Intron Phase:

Intron Coordinates:

74533239 - 74552101

Intron Length:

18863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TGTTCTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.7

0.8

77.3

35.9

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

0.65

1.7

84.22

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027337

74533047 - 74552297

19251