Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_74551905_74552101_R

Intron Information:

Intron Rank:

137395

Intron Class:

major

Intron Phase:

Intron Coordinates:

74551905 - 74552101

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

ACCTACTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

GCTTTCCAACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

69.6

0.44

0.9

65.7

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

44.3

-0.3

2.2

64.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023770

74551187 - 74552595

1409