About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_74856082_74857229_F

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
74856082 - 74857229
Intron Length:
1148

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTAAGTTAA
5'SS Class:
strong_major
3'SS Sequence:
CACTTTGCCATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTATTAA
U12 Branch Point Sequence:
GTTTTATTAAGA
Flanking Amino Acid:
YKVKGTNEDMVFRGNVDNNT
Intron Amino Acid Position:
257

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
89.2
0.92
0.8
82
26.1
Major BPS
75.5
0.63
1
66.3
40.4
Major PPT
66.3
0.37
0.9
60.7
35
Minor 5ss
39.7
-1.2
2.8
45.9
43.7
Minor BPS
59.1
0.28
1.9
72.91
38.8

Associated Gene:

Gene:
EDIL3
Ensembl Gene ID:
ENSAPLG00000016364
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000046935
74644519 - 74913610
269092
ENSAPLT00000019853
74644519 - 74904537
260019
ENSAPLT00000017081
74644519 - 74913491
268973