Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7487818_7487945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7487818 - 7487945

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GGTTTTTTAACA

Flanking Amino Acid:

AAHAAPSMGSVPSFHHPKEM

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

90.3

20.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

86.9

0.83

0.8

80.7

35.9

Minor 5ss

25.5

-2.8

4.3

42.4

45.1

Minor BPS

74.5

0.77

1.1

76.39

34.4

Associated Gene:

Gene:

SLC14A2

Ensembl Gene ID:

ENSAPLG00000012208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012750

7476771 - 7488342

11572