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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_74902330_74904421_F

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
74902330 - 74904421
Intron Length:
2092

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAAGCAA
5'SS Class:
major
3'SS Sequence:
TTTTTTTTTTCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTTAC
U12 Branch Point Sequence:
GTATTTTTACTA
Flanking Amino Acid:
YQDEKQKKDKMTKAIQSLSE
Intron Amino Acid Position:
429

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.4
0.69
1
68.2
38.4
Major BPS
86.6
0.91
0.8
77.7
36.7
Major PPT
100
1.12
0.4
100
0
Minor 5ss
29.4
-2.4
3.3
37.9
46.9
Minor BPS
55.8
0.18
1.5
63.91
37

Associated Gene:

Gene:
EDIL3
Ensembl Gene ID:
ENSAPLG00000016364
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000019853
74644519 - 74904537
260019