About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_74902330_74913341_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
74902330 - 74913341

Intron Length:
11012

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAGCAA

5'SS Class:
major

3'SS Sequence:
GCTTGTCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCACAT

U12 Branch Point Sequence:
ACTCACATAGCC

Flanking Amino Acid:
YQDEKQKKDKVFQGNFDNDT

Intron Amino Acid Position:
419

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.4
0.69
1
68.2
38.4

Major BPS
65.3
0.38
1.1
72.6
33.1

Major PPT
78.9
0.65
0.9
69.2
41.8

Minor 5ss
29.4
-2.4
3.3
37.9
46.9

Minor BPS
45
-0.4
2
56.73
41.1

Associated Gene:

Gene:
EDIL3

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

74644519 - 74913610
269092

74644519 - 74913491
268973